YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47086577, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTLAFLSLA VVAFAVLIGE RLISLRHVAL SYRELTQNYL PNCNFIEGID FGAEDITILD  60
   61 GLAFLSTGLK YPGVPSYSED PGKIYTLNLL DSEQKIKVLH IRGDFDKDSF NPHGISVYTD 120
  121 DKDGAIYLFV VNHPQGKSQV EIFRFLENEN ALEYLKTIRH ELLHNVNDIV AVGTESFYAT 180
  181 NDHYFTNDIL KIVEPFLSLP WCDVVYYSPE TVQVVAGGFL SANGINISPD KRHLYVSHIL 240
  241 KHTIAVLEIQ KNTVLSHVKE IDVGSLCDNI EVDRETGDLW IGCHPNGLKC VFHDPNDPPG 300
  301 SEVIRIENIL SEKPQVTQVY SDDGSVIIAS SVAAPYREKL LIGTVYQKAL ICDLK

Type	Start	End	Confidence
Signal Peptide	1	19	0.90
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	355	0.99