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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: WFKN_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSSALLVLL CLWPAAALGP SDADHAGVCP NQLNLHLWVD AQSTCERECH SDQDCSSSEK  60
   61 CCTNVCGLLS CVASRVSDGS SEGQWAAGGS GGSAVSCEGF ECRQQGAVCE LWEGQPVCKC 120
  121 QDLCGSEPSF TCASDGLTYF NRCYMDAEAC LQGVELSEVT CRFHLSSPNS SPLPQDPTPP 180
  181 PAPTDADTQT SAPTLYSSPQ QQVTYLGGTV SFHCDVIGQP KPEVTWEKQS DEQEQVVMRA 240
  241 DQMFGNVVIT SIGQLVVYNA QVWDSGIYSC VARNSAGVLR ADFSLSVVSH ADQDFFDDPA 300
  301 AGLPLGRPFS PADCSAAVER GDCGEKRVDW FFDPARGSCH TFTHGGCEGR NRFHTFEECR 360
  361 ASCQREGQAV CSLPAVQGPC RHWQARWFYN SLTERCEAFL YGGCSGNKNS FGTRRECDAH 420
  421 CPTHRPRPCR SCRHRGRIMD TLCSSDFAIV GQLTELIQEL DSGMARFHLQ QVLRDEKMGL 480
  481 QLFRTQHLEV LLPQVDWSCP CPNITQLQLP LLVMGVVQDG AAILLPHSYA RPVSERRLMK 540
  541 IHEALDKNIC GTLRRLQD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle