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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MIRO1_DANRE
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKDVRILLV GEPKVGKTSL IMSLVSEEFP DEVPPRAEEI TIPADVTPER VPTHIVDYSE  60
   61 AEQSDEQLYQ EITKANVICI VYSVNNKKSI EKVTSHWIPL INERTDKDSR VPLILVGNKS 120
  121 DLVEHSSMET ILPIMNQYSE IETCVECSAK NLKNISELFY YAQKAVLHPT GPLYSPEEKE 180
  181 MKPSCIKALT RIFKISDLDN DGILNDNELN FFQRTCFNIP LAPQALEDVK NVVRKNMTDG 240
  241 VKDNGLTLKG FLFLHTLFIQ RGRHETTWTV LRRFGYDDDL ELTQEYLFPL FKIPPDCTTE 300
  301 LNHNAYLFLQ SVFDKHDKDR DCALSPDELK DLFKVFPYMP WGPDVNNTVC TNEQGWITYQ 360
  361 GYLSQWTLTT YLDVQRCLEY LGYLGYSIIQ EQESQAAAIT VTRNKRIDLQ KKQTQRSVFR 420
  421 CNVLGARGCG KSGFLQAFLG RNLVRQKRIR EDHKSYYAIS TTYVYGQEKY LLLHEVLPDV 480
  481 EFLSEADLAC DVVCLVYDIS NPRSFEYCAK VYKKHFMDSK TPCVIIAAKS DLHEARQYYS 540
  541 LSPLDFCRKH KLHPPQLFTC NTTEAPSKDL YTKLTTMAMY PHMTQADLKN STFWLRASVG 600
  601 ATVFAVLGFA MYKALLKQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle