YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18858341, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPSGGGDT GSGNDQILDL GAALLNNFVY ERVRRHGDRD AEVTRSQLGG VELCDPSHKR  60
   61 LAQCLQQIGD ELDGNAQLQS MLNNSNLQPT QDVFIRVARE IFSDGKFNWG RVVALFYFAC 120
  121 RLVIKAISTR VPDIIRTIIS WTMSYIQEHV INWIREQGGW DGIRSYFGTP TWQTVGVFLA 180
  181 GVITTALVIR KM

Type	Start	End	Confidence
Cytoplasmic	1	108	0.80
Transmembrane Helix	109	127	0.51
Non-Cytoplasmic	128	168	0.74
Transmembrane Helix	169	189	0.88
Cytoplasmic	190	192	0.76