YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29468315, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSGSQSPD DALHGSWVEL EGLVASANQT EGESGAQGTT ASVLQGELER ILLEAQLECE  60
   61 RSAQTDSPPQ VVTPRTSGSP KPGSEGSSSS TDCVTIQSDE NDRRVSAEWV WDWSSRPENL 120
  121 PPKEFVFHHP KQSGSLSVRK TEVMKKGLFS SDVLLILLPS LLASHALTLG LGIYIGKRLA 180
  181 SSSTSTL

Type	Start	End	Confidence
Cytoplasmic	1	152	0.79
Transmembrane Helix	153	175	0.86
Non-Cytoplasmic	176	187	0.82