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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50539686, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSRVRPQA PQSPAASASA SPPPHEGIEM EKMHHEEVGL GVPDETPSSP PTSSSRQAWS  60
   61 RDNPGFEPEE GMMEADWPPE SQGRRSVSTT SSSSSGGVPG NFSGISARIN RGLYPTPPAQ 120
  121 EHRSCGKRIL EKMRVLWDTR LLGESNSNRE MYLKTVLREM ITYILFLLTL CIITYGMVST 180
  181 NMYYYTKVMS QLFLDTPLSS GEPTNFKSLS TMEDFWKFTE GPFLNGMYWE LWYNNKSLPE 240
  241 NQSLIYYENL LLGVPRLRQL RVRNESCSVH EDLRDEVYDC YNVYSPANED KAPFGPKNGT 300
  301 AWRFKDESSL GESSYWGQVS TYGGGGYYQD LSRTREKSAN QLQELKNNLW LDRGTRAVFL 360
  361 DFSIYNGNVN LFCIVRLLVE FPATGGAVPS WQFQTVRLLR YVSSWDYFVG MCEVSFCLFV 420
  421 LYYLVEEALE IRLHRLRYFK SLWNCLDVLI VALSVPAIIM NICRTSAVSH RLHFLLENHS 480
  481 TYPNFEPLAR LQVHFNNLAA IIVFLSWVKL FKFINFNKTM NQLSTTMSRC AKDLMGFAIM 540
  541 FFIVFLAYAQ LAYLVFGTQV NDFSTFQACI FTQFRIILGD FDFSEIEEAD SVLGPIYFTT 600
  601 FVFFIFMILL NMFLAIINDT YSEVKADMAQ QRSEMEITDL IKKSYNRAMV KLKLKKSSIN 660
  661 DIPDSLQQAA GKLSFDELRQ DLRGKGHSDA EIEAIFAKYD LDGDQELTEH EHQQMRDDLE 720
  721 KEREDLDLEH SSLPRPASGR SFSRSQDDSE EDDDEDSGHS SRRRGSSSGG VSYEEFQVLV 780
  781 RRVDRMEHSI GSIVSKIDAV IVKLEAMERA KMKRRDVLGR ILDGVMEDER MGRDPELQRE 840
  841 QMDRLVRDEL ERWESDDTMS QVSHHHHQAT PIISSAQLRP RSSRPPSSLS NEGPDAAASG 900
  901 PAHL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle