YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37589633, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKEDEKKES GSWKDFFWNP RTHELLGRTA SSWGLILLFY LVFYTFLAGV FCLTMYVMLL  60
   61 TLDDYQPTWQ DRLATPGMMI RPKGEALEIV YSRENTESWE LYVQALDSFL KPYNNSQQAV 120
  121 NNDDCTPDQF NIQEDSGNVR NNPKRSCRFN RTTLEDCSGL TDRFYGYPDG KPCILIKLNR 180
  181 VIGMKPGKDG QSPYVTCGAK KEDAESIGEI AYFPPNGTFN LMYYPYYGMK AQVNYSQPLV 240
  241 AVKFMNISFN TDVNVECKIN SNTITEFSER DKFAGRVSFK LRVNN

Type	Start	End	Confidence
Cytoplasmic	1	35	0.85
Transmembrane Helix	36	60	0.90
Non-Cytoplasmic	61	285	0.88