YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8954289
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSINGWC LSSISPAKTS LKKATLRPSV FATLTTPSSP SSSSSFPSLI QDKPVFAAPS  60
   61 HIITPTVRED MAKDYEQAIE ELQKLLREKT ELKATAAEKV EQITASLGTS SSDSIPSSEA 120
  121 SDRIKSGFLY FKKEKYDKNP ALYGELAKGQ SPKFMVFACS DSRVCPSHVL DFQPGEAFVV 180
  181 RNVANIVAPY DQSKYSGTGA AIEYAVLHLK VSNIVVIGHS ACGGIKGLLS FPFDGTYSTD 240
  241 FIEEWVKIGL PAKAKVKTQH GDAPFAELCT HCEKEAVNVS LGNLLTYPFV RDGLVNKTLA 300
  301 LKGGYYDFVK GTFELWSLNF GLASSFSV

Type	Start	End	Confidence
Signal Peptide	1	44	0.92
N-region	1	35
H-region	36	41
C-region	42	44
Cleavage Site	44	45
Non-Cytoplasmic	45	328	0.99