YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEPA_SUNMU
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLLLLGL VALSECLYKV PLVKKKSLRQ NLIENGLLKD FLAKHNVNPA SKYFPTEAAT  60
   61 ELADQPLVNY MDMEYFGTIG IGTPPQEFTV IFDTGSSNLW VPSVYCSSPA CSNHNRFNPQ 120
  121 KSSTFQSTSQ TLSIAYGTGS MTGVLGYDTV QVAGIADTNQ IFGLSQTEPG SFLYYSPFDG 180
  181 ILGLAYPNIA SSGATPVFDN MWNQGLVSQD LFSVYLSSND QSGSVVIFGG IDSSYYTGNL 240
  241 NWVPLSSEGY WQITVDSITM NGQAIACSGS CQAIVDTGTS LLSGPNNAIA NIQKSIGASQ 300
  301 NANGQMVVSC SSIQSLPDIV FTINGIQYPL PASAYILQNQ QDCTSGFQGM DIPTPSGELW 360
  361 ILGDVFIRQY FAVFDRGNNR VGLAPVA

Type	Start	End	Confidence
Signal Peptide	1	16	0.98
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	387	0.99