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Protein Overview: gi|6573645, gi|6...

General Information:
Name(s) found: gi|6573646 [NCBI NR]
gi|6573645 [NCBI NR]
gi|6435550 [NCBI NR]
gi|6435549 [NCBI NR]
Description(s) found:
Found 9 descriptions.
SHOW ALL
  • gi|6573646|pdb|2RNF|B Chain B, X-Ray Crystal Structure Of Human Ribonuclease 4 In Complex With D(Up) [NCBI NR]
  • gi|6573645|pdb|2RNF|A Chain A, X-Ray Crystal Structure Of Human Ribonuclease 4 In Complex With D(Up) [NCBI NR]
  • gi|6435550|pdb|1RNF|B Chain B, X-Ray Crystal Structure Of Unliganded Human Ribonuclease 4 [NCBI NR]
  • gi|6435549|pdb|1RNF|A Chain A, X-Ray Crystal Structure Of Unliganded Human Ribonuclease 4 [NCBI NR]
    • Organism: Homo sapiens
    Length: 120 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDGMYQRFL RQHVHPEETG GSDRYCNLMM QRRKMTLYHC KRFNTFIHED IWNIRSICST  60
   61 TNIQCKNGKM NCHEGVVKVT DCRDTGSSRA PNCRYRAIAS TRRVVIACEG NPQVPVHFDG 120
  121

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|6573645, gi|6...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] PSI-BLAST 45.69897 Ribonuclease 4

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • copper ion binding
    		•  7.83873950118271 bayes_pls_golite062009
  • ribonuclease activity
    		•  7.7836205160091 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  5.76187095683544 bayes_pls_golite062009
  • heparin binding
    		•  5.47129826629317 bayes_pls_golite062009
  • polysaccharide binding
    		•  5.05032546822599 bayes_pls_golite062009
  • actin binding
    		•  4.92941980452441 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  4.36902055736911 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  4.32374837032673 bayes_pls_golite062009
  • receptor binding
    		•  3.75411703515817 bayes_pls_golite062009
  • pattern binding
    		•  3.51086739633778 bayes_pls_golite062009
  • nuclease activity
    		•  3.07697924678131 bayes_pls_golite062009
  • carbohydrate binding
    		•  2.53927247892334 bayes_pls_golite062009
  • binding
    		•  2.456168052491 bayes_pls_golite062009
  • protein binding
    		•  2.18342402068792 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.03519718891127 bayes_pls_golite062009
  • hydrolase activity
    		•  1.87908884191558 bayes_pls_golite062009
  • DNA binding
    		•  1.74627208866206 bayes_pls_golite062009
  • transition metal ion binding
    		•  1.7277182307311 bayes_pls_golite062009
  • catalytic activity
    		•  1.25983854650131 bayes_pls_golite062009
  • cation binding
    		•  0.775506222078504 bayes_pls_golite062009
  • metal ion binding
    		•  0.775506222078504 bayes_pls_golite062009
  • ion binding
    		•  0.768541745072197 bayes_pls_golite062009
  • RNA binding
    		•  0.13382390101771 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle