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Protein Overview: gi|4996640, gi|1...

General Information:
Name(s) found: gi|4996640 [NCBI NR]
gi|115459976 [NCBI NR]
gi|113565159 [NCBI NR]
Description(s) found:
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  • gi|4996640|dbj|BAA78572.1| Dof zinc finger protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|115459976|ref|NP_001053588.1| Os04g0567800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113565159|dbj|BAF15502.1| Os04g0567800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • Dof zinc finger protein [Oryza sativa] [nrdb_11152004_Chlamydomonas]
  • Os04g0567800 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 378 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAAHWHQGL GLVKPMEEML MAANAAAGAN PNPAATAPSS VTGGALRGGG GGGAPPVAGG  60
   61 AGAGSTERRA RPQKEKALNC PRCNSTNTKF CYYNNYSLQQ PRYFCKTCRR YWTEGGSLRN 120
  121 VPVGGGSRKN KRSSSSAASA SPASASTANS VVTSASMSMS MASTGGGASK NPKLVHEGAQ 180
  181 DLNLAFPHHG GLQAPGEFPA FPSLESSSVC NPGGPMGTNG RGGGALSAME LLRSTGCYMP 240
  241 LQVPMQMPAE YATPGFALGE FRAPPPPPQS SQSLLGFSLD AHGSVGGPSA AGFGSSAGLQ 300
  301 GVPESTGRLL FPFEDLKPTV SSGTGGGGAS GGGAGVDGGH QFDHGKEQQA GGGGGGPGGH 360
  361 DTPGFWNGMI GGGSGTSW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] FFAS03 1.09 RBP9 subunit of RNA polymerase II
    2 View Details [133..378] MSA 3.155997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle