Protein Overview: AMS_ARATH

General Information:
Name(s) found:	AMS_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|22325727\|ref\|NP_179283.2\| AMS (ABORTED MICROSPORES); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR] gi\|218563495\|sp\|Q9ZVX2.2\|AMS_ARATH RecName: Full=Transcription factor ABORTED MICROSPORES; AltName: Full=Transcription factor EN 48; AltName: Full=bHLH transcription factor bHLH021; AltName: Full=Basic helix-loop-helix protein 21; Short=bHLH 21; Short=Atb [NCBI NR] Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana GN=AMS PE=1 SV=2 [Swiss-Prot] basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Basic helix-loop-helix (bHLH) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: AMS \| AMS (ABORTED MICROSPORES); DNA binding / transcription factor \| chr2:7338803-7341159 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] AMS (ABORTED MICROSPORES); DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: AMS \| basic helix-loop-helix (bHLH) DNA-binding superfamily protein \| chr2:7331721-7334077 FORWARD LENGTH=571 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	571 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA]
Biological Process:	tapetal layer development [IMP] pollen development [IMP] regulation of transcription [TAS]
Molecular Function:	DNA binding [ISS] transcription factor activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESNMQNLLE KLRPLVGARA WDYCVLWRLN EDQRFVKWMG CCCGGTELIA ENGTEEFSYG  60
   61 GCRDVMFHHP RTKSCEFLSH LPASIPLDSG IYAETLLTNQ TGWLSESSEP SFMQETICTR 120
  121 VLIPIPGGLV ELFATRHVAE DQNVVDFVMG HCNMLMDDSV TINMMVADEV ESKPYGMLSG 180
  181 DIQQKGSKEE DMMNLPSSYD ISADQIRLNF LPQMSDYETQ HLKMKSDYHH QALGYLPENG 240
  241 NKEMMGMNPF NTVEEDGIPV IGEPSLLVNE QQVVNDKDMN ENGRVDSGSD CSDQIDDEDD 300
  301 PKYKKKSGKG SQAKNLMAER RRRKKLNDRL YALRSLVPRI TKLDRASILG DAINYVKELQ 360
  361 NEAKELQDEL EENSETEDGS NRPQGGMSLN GTVVTGFHPG LSCNSNVPSV KQDVDLENSN 420
  421 DKGQEMEPQV DVAQLDGREF FVKVICEYKP GGFTRLMEAL DSLGLEVTNA NTTRYLSLVS 480
  481 NVFKVEKNDN EMVQAEHVRN SLLEITRNTS RGWQDDQMAT GSMQNEKNEV DYQHYDDHQH 540
  541 HNGHHHPFDH QMNQSAHHHH HHQHINHYHN Q

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..151]	MSA	6.176982	View MSA. No confident structure predictions are available.
2	View Details	[152..290]	deduced	N/A	No confident structure predictions are available.
3	View Details	[291..421]	PSI-BLAST	16.154902	Myc prot-oncogene protein
4	View Details	[422..571]	FFAS03	1.52	Crystal structure of putative glycine cleavage system transcriptional repressor

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: AMS_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: