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Protein Overview: EDR2_ARATH

General Information:
Name(s) found: EDR2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|42566947|ref|NP_193639.2| EDR2; lipid binding [Arabidopsis thaliana] [NCBI NR]
  • Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana GN=EDR2 PE=2 SV=1 [Swiss-Prot]
  • pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pleckstrin homology (PH) domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: EDR2 | EDR2 (enhanced disease resistance 2); lipid binding | chr4:10431810-10437182 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • lipid binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: EDR2 | ENHANCED DISEASE RESISTANCE 2 | chr4:10431799-10437171 REVERSE LENGTH=718 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Enhanced disease resistance 2 protein OS=Arabidopsis thaliana GN=EDR2 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 718 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV  60
   61 EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM WKEKIESVID QHQESQVPNG 120
  121 QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE 180
  181 FDAELANQNS DNQAFSRKHW RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE 240
  241 EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW 300
  301 RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL 360
  361 KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT RIPVMVNMAS SSLSLTKSGK 420
  421 SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN 480
  481 IDLSCFSGNL KRNENENARN CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK 540
  541 DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV 600
  601 DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST 660
  661 VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV RVSHIELSSA IVPNLESE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] FFAS03 5.28 No description for 2ys3A was found.
    2 View Details [152..399] PSI-BLAST 33.39794 Cholesterol-regulated Start protein 4 (Stard4).
    3 View Details [400..494] MSA 2.144992 View MSA. No confident structure predictions are available.
    4 View Details [495..618] deduced N/A No confident structure predictions are available.
    5 View Details [619..718] MSA 2.02997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle