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Protein Overview: PP307_ARATH

General Information:
Name(s) found: PP307_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1064 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKYIWLVRL WHSKEEPMFL RSVSSSFIFI HGVPRKLKTR TVFPTLCGTR RASFAAISVY  60
   61 ISEDESFQEK RIDSVENRGI RPNHQTLKWL LEGCLKTNGS LDEGRKLHSQ ILKLGLDSNG 120
  121 CLSEKLFDFY LFKGDLYGAF KVFDEMPERT IFTWNKMIKE LASRNLIGEV FGLFVRMVSE 180
  181 NVTPNEGTFS GVLEACRGGS VAFDVVEQIH ARILYQGLRD STVVCNPLID LYSRNGFVDL 240
  241 ARRVFDGLRL KDHSSWVAMI SGLSKNECEA EAIRLFCDMY VLGIMPTPYA FSSVLSACKK 300
  301 IESLEIGEQL HGLVLKLGFS SDTYVCNALV SLYFHLGNLI SAEHIFSNMS QRDAVTYNTL 360
  361 INGLSQCGYG EKAMELFKRM HLDGLEPDSN TLASLVVACS ADGTLFRGQQ LHAYTTKLGF 420
  421 ASNNKIEGAL LNLYAKCADI ETALDYFLET EVENVVLWNV MLVAYGLLDD LRNSFRIFRQ 480
  481 MQIEEIVPNQ YTYPSILKTC IRLGDLELGE QIHSQIIKTN FQLNAYVCSV LIDMYAKLGK 540
  541 LDTAWDILIR FAGKDVVSWT TMIAGYTQYN FDDKALTTFR QMLDRGIRSD EVGLTNAVSA 600
  601 CAGLQALKEG QQIHAQACVS GFSSDLPFQN ALVTLYSRCG KIEESYLAFE QTEAGDNIAW 660
  661 NALVSGFQQS GNNEEALRVF VRMNREGIDN NNFTFGSAVK AASETANMKQ GKQVHAVITK 720
  721 TGYDSETEVC NALISMYAKC GSISDAEKQF LEVSTKNEVS WNAIINAYSK HGFGSEALDS 780
  781 FDQMIHSNVR PNHVTLVGVL SACSHIGLVD KGIAYFESMN SEYGLSPKPE HYVCVVDMLT 840
  841 RAGLLSRAKE FIQEMPIKPD ALVWRTLLSA CVVHKNMEIG EFAAHHLLEL EPEDSATYVL 900
  901 LSNLYAVSKK WDARDLTRQK MKEKGVKKEP GQSWIEVKNS IHSFYVGDQN HPLADEIHEY 960
  961 FQDLTKRASE IGYVQDCFSL LNELQHEQKD PIIFIHSEKL AISFGLLSLP ATVPINVMKN1020
 1021 LRVCNDCHAW IKFVSKVSNR EIIVRDAYRF HHFEGGACSC KDYW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..216] MSA 1.24098 View MSA. No confident structure predictions are available.
    2 View Details [217..348] PSI-BLAST 8.69897 No description for 2gw1A was found.
    3 View Details [349..1064] PSI-BLAST 10.69897 Clathrin D6 Coat


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.69

    Source: Reynolds et al. (2008)

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