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Protein Overview: gi|18408889

General Information:
Name(s) found: gi|18408889 [NCBI NR]
Description(s) found:
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  • gi|18408889|ref|NP_564913.1| protein kinase family protein [Arabidopsis thaliana] [NCBI NR]
  • protein kinase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Protein kinase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | protein kinase family protein | chr1:25461008-25466099 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ signal transducer [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | PAS domain-containing protein tyrosine kinase family protein | chr1:25457345-25462436 FORWARD LENGTH=765 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • PAS domain-containing protein tyrosine kinase OS=Arabidopsis thaliana GN=At1g67890 PE=2 SV=1 [ARATH-contam.fasta]
  • PAS domain-containing protein tyrosine kinase OS=Arabidopsis thaliana GN=At1g67890 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 765 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENPNPPAEK LLKKIRELEE SQEDLKREMS KLKVSAEIKR RSHSSSPKRP SRRNSGEGTP  60
   61 LWRKTGAASF RHASPLRKES HSKDGVAGGG DGPSAGKFTD KQYLNILQSM AQAVHVFDLN 120
  121 GQIIFWNSMA EKLYGFSAAE ALGKDSINIL VDGQDAAVAK NIFQRCSSGE SWTGEFPVKN 180
  181 KMGERFSVVT TISPFYDDDG LLIGIICITN DSALFQRPRV PPAKNRWQEG DSSFCRGTNG 240
  241 VASRLGFDSK EAVVSKLGLD SQQPIQAAIA SKISDLASKV GNKVRSKMRA GDNNASHPEG 300
  301 GNGGSHQSDQ GFFDAAFSDQ REDAETNDAS TPRGNLIQSP FGVFLCNDDK SSSKASGESN 360
  361 DENDRNSVVP KKLTSKTEEW MVKKGLSWPW KGNEREGLER RNAHSVWPWV HNEQQKEEAH 420
  421 HSNSYNSVKS ESLASESNKP ANNENMGSVN VNSASSASSC GSTSSSVMNK VDMDSDCLDY 480
  481 EILWEDLTIG EQIGQGSCGT VYHGLWFGSD VAVKVFSKQE YSEEIITSFK QEVSLMKRLR 540
  541 HPNVLLFMGA VASPQRLCIV TEFLPRGSLF RLLQRNKSKL DLRRRIHMAS DIARGMNYLH 600
  601 HCSPPIIHRD LKSSNLLVDR NWTVKVADFG LSRIKHETYL TTNGRGTPQW MAPEVLRNEA 660
  661 ADEKSDVYSF GVVLWELVTE KIPWENLNAM QVIGAVGFMN QRLEVPKDVD PQWIALMESC 720
  721 WHSEPQCRPS FQELMDKLRE LQRKYTIQFQ AARAASIDNS SLKEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] deduced N/A No confident structure predictions are available.
    2 View Details [96..227] PSI-BLAST 17.522879 No description for 2gj3A was found.
    3 View Details [228..349] deduced N/A No confident structure predictions are available.
    4 View Details [350..765] PSI-BLAST 89.09691 CHICKEN SRC TYROSINE KINASE


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle