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Protein Overview: RLMH_ECO8A

General Information:
Name(s) found: RLMH_ECO8A [Swiss-Prot]
Description(s) found:
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  • gi|226734662|sp|B7M5G3.1|RLMH_ECO8A RecName: Full=Ribosomal RNA large subunit methyltransferase H; AltName: Full=rRNA (pseudouridine-N3-)-methyltransferase rlmH; AltName: Full=23S rRNA m3Psi1915 methyltransferase [NCBI NR]
  • gi|218553178|ref|YP_002386091.1| rRNA large subunit methyltransferase [Escherichia coli IAI1] [NCBI NR]
  • gi|218359946|emb|CAQ97490.1| conserved hypothetical protein [Escherichia coli IAI1] [NCBI NR]
  • Ribosomal RNA large subunit methyltransferase H OS=Escherichia coli O8 (strain IAI1) GN=rlmH PE=3 SV=1 [Swiss-Prot]
    • Organism: Escherichia coli IAI1
    Length: 155 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLQLVAVGT KMPDWVQTGF TEYLRRFPKD MPFELIEIPA GKRGKNADIK RILDKEGEQM  60
   61 LAAAGKNRIV TLDIPGKPWD TPQLAAELER WKLDGRDVSL LIGGPEGLSP ACKAAAEQSW 120
  121 SLSALTLPHP LVRVLVAESL YRAWSITTNH PYHRE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 64.0 Hypothetical protein YbeA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • RNA methyltransferase activity
    		•  4.23455016472464 bayes_pls_golite062009
  • methyltransferase activity
    		•  3.59960278169345 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  3.51722801996622 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  3.14976989427746 bayes_pls_golite062009
  • tRNA methyltransferase activity
    		•  2.33123191403389 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  2.23755555119187 bayes_pls_golite062009
  • tRNA (guanine) methyltransferase activity
    		•  2.14623472760939 bayes_pls_golite062009
  • tRNA (guanine-N1-)-methyltransferase activity
    		•  2.0947794364355 bayes_pls_golite062009
  • transferase activity
    		•  1.63934797352054 bayes_pls_golite062009
  • catalytic activity
    		•  0.797300463760338 bayes_pls_golite062009
  • rRNA (guanine) methyltransferase activity
    		•  0.319046095835882 bayes_pls_golite062009
  • binding
    		•  0.178115162253014 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  0.118357993944566 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle