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Protein Overview: gi|165927660, gi...

General Information:
Name(s) found: gi|165927660 [NCBI NR]
gi|165920414 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|165927660|ref|ZP_02223492.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] [NCBI NR]
  • gi|165920414|gb|EDR37691.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] [NCBI NR]
    • Organism: Yersinia pestis biovar Orientalis str. F1991016
    Length: 461 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKIFNTLSR QKEEFKPIHA GKVGMYVCGI TIYDLCHIGH GRTFVAFDVV ARYLRYLGYS  60
   61 LTYVRNVTDV DDKIIKRAIE NNETCEQLTT RMLAEMHKDF DALNLERPDL EPRATHHIAE 120
  121 IIEMTERLIA RGHAYVASNG DVMFAVDSDP DYGVLSRQDL DQLQAGARVE VADVKRNPMD 180
  181 FVLWKMSKPG EPRWESPWGP GRPGWHIECS AMNGKQLGAH FDIHGGGSDL MFPHHENEIA 240
  241 QSTCAHDGPY VNYWMHSGMV MIDKEKMSKS LNNFFTIRDV LAYYDAETVR YFLMSGHYRS 300
  301 QLNYSEENLK QARASLERLY TALRGTDANA TPAGGAEFEA RFRTAMDDDF NTPEAYSVLF 360
  361 DIAREVNRLK NEDMAAANGL AAELRKLAQV LGLLEQDPEL FLQGGAQADD DEVAKIEALI 420
  421 KQRNDARSSK NWALADAARD QLNELGIVLE DGPQGTTWRR K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..461] PSI-BLAST 94.154902 Cysteinyl-tRNA synthetase (CysRS)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming carbon-oxygen bonds
    		•  7.16276509815667 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  7.16276509815667 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  7.13957775963187 bayes_pls_golite062009
  • ligase activity
    		•  6.11211476973434 bayes_pls_golite062009
  • cysteine-tRNA ligase activity
    		•  5.23703961447809 bayes_pls_golite062009
  • isoleucine-tRNA ligase activity
    		•  3.76808520367507 bayes_pls_golite062009
  • glutamate-tRNA ligase activity
    		•  2.63681738794687 bayes_pls_golite062009
  • catalytic activity
    		•  2.37674226834122 bayes_pls_golite062009
  • methionine-tRNA ligase activity
    		•  2.01261843164558 bayes_pls_golite062009
  • tyrosine-tRNA ligase activity
    		•  1.88984817882585 bayes_pls_golite062009
  • tryptophan-tRNA ligase activity
    		•  1.14187887833901 bayes_pls_golite062009
  • arginine-tRNA ligase activity
    		•  1.13743634264647 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.2293846471193 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.161799496958314 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.126511747475258 bayes_pls_golite062009
  • glutamine-tRNA ligase activity
    		•  0.118292082006187 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle