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Protein Overview: gi|165921021, gi...

General Information:
Name(s) found: gi|165927125 [NCBI NR]
gi|165921021 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|165927125|ref|ZP_02222957.1| D-methionine ABC transporter, periplasmic D-methionine-binding protein [Yersinia pestis biovar Orientalis str. F1991016] [NCBI NR]
  • gi|165921021|gb|EDR38245.1| D-methionine ABC transporter, periplasmic D-methionine-binding protein [Yersinia pestis biovar Orientalis str. F1991016] [NCBI NR]
    • Organism: Yersinia pestis biovar Orientalis str. F1991016
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKFKSIAA ISALIGTLTL VGCGPTEKAP NHIKVGVIVG AEQQVAEVAQ KVAKEKYGLD  60
   61 VELVTFNDYV LPNEALSKGD IDLNAFQHKP YLDQQIKDRG YKLVSVGNSF VYPIAGYSKK 120
  121 IKSLDELQPG SQVALPNDPT NLGRSLLLLQ SVGLIKLKDG VGLLPTVLDV VENPKNLKLV 180
  181 ELEAPQLPRS LDDQQIALAI INTTYASQIG LTPAKDGLFV EDKESPYVNL IVAREDNKDA 240
  241 ENVKKFVQAY QSDEVYDAAN KAFNGGAVKG W

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..271] PSI-BLAST 42.30103 The Crystal Structure of Lipoprotein Tp32 from Treponema pallidum

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  3.92658561501282 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.71430307970333 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  3.68263102620434 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  3.45855021324499 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  3.44437031517765 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.34421502810243 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  3.33883206510679 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  3.33572158012752 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  3.31947078781945 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  3.3164655425684 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  3.3159417475856 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  3.25041295044206 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.76254706952599 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  2.65558937563899 bayes_pls_golite062009
  • amino acid transmembrane transporter activity
    		•  2.47628874886983 bayes_pls_golite062009
  • amine binding
    		•  2.4097403582482 bayes_pls_golite062009
  • ATPase activity
    		•  2.40029628345531 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  2.3103850882599 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.2348608319417 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.21542452486366 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.21260159167253 bayes_pls_golite062009
  • sulfur amino acid transmembrane transporter activity
    		•  2.14594454285001 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.84929214408108 bayes_pls_golite062009
  • D-methionine transmembrane transporter activity
    		•  1.72463508462925 bayes_pls_golite062009
  • methionine transmembrane transporter activity
    		•  1.72463508462925 bayes_pls_golite062009
  • amino acid-transporting ATPase activity
    		•  1.65232476690022 bayes_pls_golite062009
  • amine-transporting ATPase activity
    		•  1.59812090922796 bayes_pls_golite062009
  • binding
    		•  1.54172013140566 bayes_pls_golite062009
  • amino acid binding
    		•  1.18820874048991 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  0.88623763826001 bayes_pls_golite062009
  • hydrolase activity
    		•  0.825775589802563 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.75669016367838 bayes_pls_golite062009
  • polyamine transmembrane transporter activity
    		•  0.621740283439039 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  0.555351218220589 bayes_pls_golite062009
  • polyamine-transporting ATPase activity
    		•  0.436507323554782 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.343508026849565 bayes_pls_golite062009
  • L-amino acid transmembrane transporter activity
    		•  0.29299124929094 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
    		•  0.149393758153546 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.0237973852493387 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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