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Protein Overview: gi|327778

General Information:
Name(s) found: gi|327778 [NCBI NR]
Description(s) found:
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  • gi|327778|gb|AAB03522.1| gag polyprotein [NCBI NR]
  • Gag polyprotein [Contains: Core protein p17 (Matrix protein); Core protein p24 (Core antigen); Core protein p2; Core protein p7 (Nucleocapsid protein); Core protein p1; Core protein p6]gi|327778|gb|AAB03522.1| gag polyprotein [nrdb_11152004_Chlamydomonas]
  • gag polyprotein [nr-271106-contam.fasta]
    • Organism: Human immunodeficiency virus 1
    Length: 500 amino acids

    Gene Ontology:
    Cellular Component: cytosol [UNKNOWNLink to PubMed articleLink to PubMed articleLink to PubMed article][TAS]
    nucleoplasm [TAS]
    Biological Process: uncoating of virus [TAS]
    entry into host cell [TAS]
    viral reproduction [TAS]
    provirus integration [UNKNOWNLink to PubMed article][TAS]
    RNA-dependent DNA replication [TAS]
    initiation of viral infection [UNKNOWNLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGARASVLSG GELDRWEKIR LRPGGKKKYK LKHIVWASRE LERFAVNPSL LETSEGCRQI  60
   61 LGQLQPSLQT GSEELKSLFN TVATLYCVHQ RIEVKDTKEA LEKIEEEQNK SKKKAQQAAA 120
  121 DTGNSSKVSQ NYPIVQNIQG QMVHQAISPR TLNAWVKVVE EKAFSPEVIP MFSALSEGAT 180
  181 PQDLNTMLNT VGGHQAAMQM LKETINEEAA EWDRLHPAQA GPIAPGQMRE PRGSDIAGTT 240
  241 STLQEQIGWM TSNPPIPVGE IYKRWIILGL NKIVRMYSPS SILDIRQGPK EPFRDYVDRF 300
  301 YKTLRAEQAS QEVKNWMTET LLVQNANPDC KTILKALGPA ATLEEMMTAC QGVGGPGHKA 360
  361 RVLAEAMSQV TNSTTIMMQR GNFRNQRKII KCFNCGKEGH LARNCRAPRK KGCWKCGKEG 420
  421 HQMKDCNERQ ANFLGKIWPS SKGRPGNFLQ SRPEPTAPPE ESFRFGEETT TPSQKQEPRD 480
  481 KELYPLASLR SLFGNDPSSP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle