YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PROF2_RAT

General Information:
Name(s) found: PROF2_RAT [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|20178018|sp|Q9EPC6.3|PROF2_RAT RecName: Full=Profilin-2; AltName: Full=Profilin II [NCBI NR]
  • gi|149064722|gb|EDM14873.1| profilin 2, isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|10952518|gb|AAG24948.1|AF228737_1 profilin IIa [Rattus norvegicus] [NCBI NR]
  • gi|10952516|gb|AAG24947.1|AF228736_1 profilin IIa [Rattus norvegicus] [NCBI NR]
  • Profilin-2 OS=Rattus norvegicus GN=Pfn2 PE=1 SV=3 [Swiss-Prot]
  • Profilin IIgi|10952518|gb|AAG24948.1| profilin IIa [Rattus norvegicus]gi|10952516|gb|AAG24947.1| profilin IIa [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Profilin-2 (Profilin II) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • profilin 2, isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • profilin IIa [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Isoform IIa of Profilin-2 OS=Rattus norvegicus GN=Pfn2 [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 140 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    actin cytoskeleton [IEA]
    Biological Process: regulation of actin filament polymerization [IDA]
    actin cytoskeleton organization [IEA]
    Molecular Function: protein binding [UNKNOWN]
    actin binding [IDA][IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGWQSYVDN LMCDGCCQEA AIVGYCDAKY VWAATAGGVF QSITPAEIDV IIGKDREGFF  60
   61 TNGLTLGGKK CSVIRDSLYV DSDCTMDIRT KSQGGEPTYN VAVGRAGRVL VFVMGKEGVH 120
  121 GGGLNKKAYS MAKYLRDSGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] PSI-BLAST 46.0 Profilin (actin-binding protein)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  7.981958446142 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  6.51470611165788 bayes_pls_golite062009
  • actin monomer binding
    		•  3.80837480536839 bayes_pls_golite062009
  • binding
    		•  3.26636517628678 bayes_pls_golite062009
  • phosphatidylinositol-4,5-bisphosphate binding
    		•  3.08913463974786 bayes_pls_golite062009
  • protein binding
    		•  2.14534188091242 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle