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Protein Overview: gi|41619138, gi|...

General Information:
Name(s) found: gi|41619138 [NCBI NR]
gi|18401993 [NCBI NR]
gi|15375308 [NCBI NR]
gi|110738058 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|41619138|gb|AAS10032.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|18401993|ref|NP_564519.1| MYB112 (myb domain protein 112); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|15375308|gb|AAG38379.2| putative transcription factor MYB112 [Arabidopsis thaliana] [NCBI NR]
  • gi|110738058|dbj|BAF00963.1| putative transcription factor MYB112 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 243 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to abscisic acid stimulus [IEP]
    response to salt stress [IEP]
    regulation of transcription, DNA-dependent [ISS]
    response to cadmium ion [IEP]
    response to salicylic acid stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL  60
   61 SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE LHSRWGNRWS KIAQHLPGRT 120
  121 DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE 180
  181 NSSVATATSS TSSSEAVRSS FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW 240
  241 LIQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] PSI-BLAST 37.522879 c-Myb, DNA-binding domain
    2 View Details [140..243] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle