YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|194414030, gi...

General Information:
Name(s) found: gi|194427797 [NCBI NR]
gi|194414030 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|194427797|ref|ZP_03060343.1| lytic murein transglycosylase B [Escherichia coli B171] [NCBI NR]
  • gi|194414030|gb|EDX30306.1| lytic murein transglycosylase B [Escherichia coli B171] [NCBI NR]
    • Organism: Escherichia coli B171
    Length: 361 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKRRYVTLL PLFVLLAACS SKPKPTETDT TTGTPSGGFL LEPQHNVMQM GGDFANNPNA  60
   61 QQFIDKMVNK HGFDRQQLQE ILSQAKRLDS VLRLMDNQAP TTSVKPPSGP NGAWLRYRKK 120
  121 FITPDNVQNG VVFWNQYEDA LNRAWQVYGV PPEIIVGIIG VETRWGRVMG KTRILDALAT 180
  181 LSFNYPRRAE YFSGELETFL LMARDEQDDP LNLKGSFAGA MGYGQFMPSS YKQYAVDFSG 240
  241 DGHINLWDPV DAIGSVANYF KAHGWVKGDQ VAVMANGQAP GLPNGFKTKY SISQLAAAGL 300
  301 TPQQPLGNHQ QASLLRLDVG TGYQYWYGLP NFYTITRYNH STHYAMAVWQ LGQAVALARV 360
  361 Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..361] PSI-BLAST 94.69897 36 kDa soluble lytic transglycosylase, SLT35

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • penicillin binding
    		•  2.70802519764961 bayes_pls_golite062009
  • catalytic activity
    		•  1.95328415115451 bayes_pls_golite062009
  • lysozyme activity
    		•  1.83799209924951 bayes_pls_golite062009
  • drug binding
    		•  1.60556297504678 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  1.16054683174437 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  1.07226857049823 bayes_pls_golite062009
  • hydrolase activity
    		•  0.677491712259 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.45061419828567 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle