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Protein Overview: gi|194514247, gi...

General Information:
Name(s) found: gi|254198554 [NCBI NR]
gi|194514247 [NCBI NR]
gi|169655294 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|254198554|ref|ZP_04904975.1| 30S ribosomal protein S8 [Burkholderia pseudomallei S13] [NCBI NR]
  • gi|194514247|ref|YP_002049754.1| 30S ribosomal protein S8 [Burkholderia pseudomallei S13] [NCBI NR]
  • gi|169655294|gb|EDS87987.1| 30S ribosomal protein S8 [Burkholderia pseudomallei S13] [NCBI NR]
    • Organism: Burkholderia pseudomallei S13
    Length: 131 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMSDPIADM LTRIRNAQMV EKVSVSMPSS KVKVAIAQVL KDEGYIDDFA VKADGAKAEL  60
   61 NIALKYYAGR PVIERLERVS KPGLRVYRGR NEIPQVMNGL GVAIVSTPKG VMTDRKARAT 120
  121 GVGGEVICYV A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 48.045757 No description for 1vs5H was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.91574154879999 bayes_pls_golite062009
  • structural molecule activity
    		•  9.33953790706737 bayes_pls_golite062009
  • RNA binding
    		•  3.60072898867086 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.6893953910876 bayes_pls_golite062009
  • binding
    		•  1.38159031366603 bayes_pls_golite062009
  • protein binding
    		•  0.362605314771104 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle