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Protein Overview: gi|187252543

General Information:
Name(s) found: gi|187252543 [NCBI NR]
Description(s) found:
  • gi|187252543|gb|AAI66704.1| Zinc finger protein 167 [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 754 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTAGRGNLG LIPRSTAFQK QEGRLTVKQE PANQTWGQGS SLQKNYPPVC EIFRLHFRQL  60
   61 CYHEMSGPQE ALSRLRELCR WWLMPEVHTK EQILELLVLE QFLSILPGEL RTWVQLHHPE 120
  121 SGEEAVAVVE DFQRHLSGSE EVSAPAQKQE MHFEETTALG TTKESPPTSP LSGGSAPGAH 180
  181 LEPPYDPGTH HLPSGDFAQC TSPVPTLPQV GNSGDQAGAT VLRMVRPQDT VAYEDLSVDY 240
  241 TQKKWKSLTL SQRALQWNMM PENHHSMASL AGENMMKGSE LTPKQEFFKG SESSNRTSGG 300
  301 LFGVVPGAAE TGDVCEDTFK ELEGQTSDEE GSRLENDFLE ITDEDKKKST KDRYDKYKEV 360
  361 GEHPPLSSSP VEHEGVLKGQ KSYRCDECGK AFNRSSHLIG HQRIHTGEKP YECNECGKTF 420
  421 RQTSQLIVHL RTHTGEKPYE CSECGKAYRH SSHLIQHQRL HNGEKPYKCN ECAKAFTQSS 480
  481 RLTDHQRTHT GEKPYECNEC GEAFIRSKSL ARHQVLHTGK KPYKCNECGR AFCSNRNLID 540
  541 HQRIHTGEKP YECSECGKAF SRSKCLIRHQ SLHTGEKPYK CSECGKAFNQ NSQLIEHERI 600
  601 HTGEKPFECS ECGKAFGLSK CLIRHQRLHT GEKPYKCNEC GKSFNQNSHL IIHQRIHTGE 660
  661 KPYECNECGK VFSYSSSLMV HQRTHTGEKP YKCNDCGKAF SDSSQLIVHQ RVHTGEKPYE 720
  721 CSECGKAFSQ RSTFNHHQRT HTGEKSSGLA WSVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..202] FFAS03 4.07 Solution structure of the SCAN homodimer from MZF-1/ZNF42
    2 View Details [203..276] deduced N/A No confident structure predictions are available.
    3 View Details [277..493] FFAS03 7.9 No description for 2i13A was found.
    4 View Details [494..676] PSI-BLAST 40.30103 No description for 2i13A was found.
    5 View Details [677..754] PSI-BLAST 6.0 ZIF268

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  3.97572076253445 bayes_pls_golite062009
  • DNA binding
    		•  3.38941894783956 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.3197625917842 bayes_pls_golite062009
  • transcription factor activity
    		•  2.69648667931275 bayes_pls_golite062009
  • transcription activator activity
    		•  2.64323093360221 bayes_pls_golite062009
  • binding
    		•  2.59742365390538 bayes_pls_golite062009
  • transcription repressor activity
    		•  2.1174449104536 bayes_pls_golite062009
  • protein binding
    		•  1.91815434972195 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.797371870302703 bayes_pls_golite062009
  • transcription corepressor activity
    		•  0.101314838383672 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle