YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|326422

General Information:
Name(s) found: gi|326422 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|326422|gb|AAB59749.1| vpr protein [Human immunodeficiency virus 1] [NCBI NR]
  • VPR protein (R ORF protein)gi|326422|gb|AAB59749.1| vpr protein [nrdb_11152004_Chlamydomonas]
  • vpr protein [nr-271106-contam.fasta]
    • Organism: Human immunodeficiency virus 1
    Length: 96 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial intermembrane space [UNKNOWNLink to PubMed article]
    cytosol [UNKNOWNLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article][TAS]
    nucleoplasm [TAS]
    Biological Process: uncoating of virus [TAS]
    entry into host cell [TAS]
    viral reproduction [TAS]
    provirus integration [UNKNOWNLink to PubMed article][TAS]
    RNA-dependent DNA replication [TAS]
    initiation of viral infection [UNKNOWNLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQAPEDQGP QREPHNEWTL ELLEELKNEA VRHFPRIWLH GLGQHIYETY GDTWAGVEAI  60
   61 IRILQQLLFI HFRIGCRHSR IGVTQQRRAR NGASRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] PSI-BLAST 44.69897 VPR protein fragments


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle