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Protein Overview: SKP_PHOLL

General Information:
Name(s) found: SKP_PHOLL [Swiss-Prot]
Description(s) found:
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  • gi|37524682|ref|NP_928026.1| periplasmic chaperone [Photorhabdus luminescens subsp. laumondii TTO1] [NCBI NR]
  • gi|36784107|emb|CAE12976.1| Histone-like protein HLP-1 precursor [Photorhabdus luminescens subsp. laumondii TTO1] [NCBI NR]
  • Chaperone protein Skp OS=Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) GN=skp PE=3 SV=1 [Swiss-Prot]
  • Histone-like protein HLP-1 precursor [Photorhabdus luminescens subsp. laumondii TTO1]gi|37524682|ref|NP_928026.1| Histone-like protein HLP-1 precursor [Photorhabdus luminescens subsp. laumondii TTO1] [nrdb_11152004_Chlamydomonas]
  • Histone-like protein HLP-1 precursor [Photorhabdus luminescens subsp. laumondii TTO1] [nr-271106-contam.fasta]
    • Organism: Photorhabdus luminescens subsp. laumondii TTO1
    Length: 165 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLCAASF GIALAFSVGA QAADKIAVVN VGEIFQQLPA REAVVKQLEN EFKNRASELQ  60
   61 RMETDLQSKI QKLQRDGSTM KSSERTNLEK EVMAKREEFA KKAQAFEQDH RRREMEERNK 120
  121 ILSRIQDAIK VVAGKEGYDV VIDANAVAYS VSGKNITTSV LKQVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] PSI-BLAST 19.09691 Crystal structure of the periplasmic chaperone Skp

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.90264670077178 bayes_pls_golite062009
  • unfolded protein binding
    		•  1.7887148828099 bayes_pls_golite062009
  • protein binding
    		•  0.404450175883241 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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