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Protein Overview: gi|36784775, gi|...

General Information:
Name(s) found: gi|37525348 [NCBI NR]
gi|36784775 [NCBI NR]
Description(s) found:
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  • gi|37525348|ref|NP_928692.1| glucose-specific PTS system component [Photorhabdus luminescens subsp. laumondii TTO1] [NCBI NR]
  • gi|36784775|emb|CAE13685.1| PTS system, glucose-specific IIA component (EIIA-GLC) (Glucose-permease IIA component) (Phosphotransferase enzyme II, A component) (EIII-GLC) [Photorhabdus luminescens subsp. laumondii TTO1] [NCBI NR]
  • PTS system, glucose-specific IIA component (EIIA-GLC) (Glucose-permease IIA component) (Phosphotransferase enzyme II, A component) (EIII-GLC) [Photorhabdus luminescens subsp. laumondii TTO1]gi|37525348|ref|NP_928692.1| PTS system, glucose-specific IIA co [nrdb_11152004_Chlamydomonas]
  • PTS system, glucose-specific IIA component (EIIA-GLC) (Glucose-permease IIA component) (Phosphotransferase enzyme II, A component) (EIII-GLC) [Photorhabdus luminescens subsp. laumondii TTO1] [nr-271106-contam.fasta]
  • glucose-specific PTS system enzyme IIA component [Photorhabdus luminescens subsp. laumondii TTO1] [nr-271106-contam.fasta]
    • Organism: Photorhabdus luminescens subsp. laumondii TTO1
    Length: 169 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLFDKLKSL VSDDKKNSGT IEIIAPLSGE IVNIEDVPDV VFAEKIVGDG IAIKPAGNKI  60
   61 VAPVDGTIGK IFETNHAFSI ESDSGIELFV HFGIDTVELK GEGFKRIAEE GQRVQKGDLV 120
  121 LEFDLKFLEE RAKSTLTPVV ISNMDEIKEL SKLSGSVTVG ETPIMRIKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] PSI-BLAST 53.09691 Glucose-specific factor III (glsIII)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • carbohydrate transmembrane transporter activity
    		•  2.13836390376928 bayes_pls_golite062009
  • binding
    		•  1.28730362877885 bayes_pls_golite062009
  • transporter activity
    		•  0.711149297585691 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.517650155593165 bayes_pls_golite062009
  • protein binding
    		•  0.445041376423941 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.276105437109391 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.243355624712309 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.113736784801445 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle