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Protein Overview: gi|36785269, gi|...

General Information:
Name(s) found: gi|37525840 [NCBI NR]
gi|36785269 [NCBI NR]
Description(s) found:
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  • gi|37525840|ref|NP_929184.1| flagellar basal body rod modification protein [Photorhabdus luminescens subsp. laumondii TTO1] [NCBI NR]
  • gi|36785269|emb|CAE14210.1| Basal-body rod modification protein FlgD (flagellar protein for the initiation of hook assembly) [Photorhabdus luminescens subsp. laumondii TTO1] [NCBI NR]
  • Basal-body rod modification protein FlgD (flagellar protein for the initiation of hook assembly) [Photorhabdus luminescens subsp. laumondii TTO1]gi|37525840|ref|NP_929184.1| Basal-body rod modification protein FlgD (flagellar protein for the initiation o [nrdb_11152004_Chlamydomonas]
  • Basal-body rod modification protein FlgD (flagellar protein for the initiation of hook assembly) [Photorhabdus luminescens subsp. laumondii TTO1] [nr-271106-contam.fasta]
    • Organism: Photorhabdus luminescens subsp. laumondii TTO1
    Length: 231 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAITGSVNES LNNTIVGEPV LAGKKKGSEE LNSNFMKLLV AQMKNQDPTN PMKNNELTSH  60
   61 LAQINTLAGI EKLNTTLGSI VGQINNNQPV QASALIGRGV MIPGNTILAG LDKEAGNVST 120
  121 TPYGIELERP ADSVQVTIID KQGGVVRQID LGGLEAGVHS FRPWDGKKED GTNVEDGAYN 180
  181 FTITASYKGE QRVFQPLRFA KVNGVTRDAD GAKLDLGRIG AVTMDQIRQI L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] Pfam 7.920819 No description for PF03963.5 was found. No confident structure predictions are available.
    2 View Details [96..231] PSI-BLAST 11.30103 Structure of C5a peptidase- a key virulence factor from Streptococcus


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle