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Protein Overview: gi|238902633, gi...

General Information:
Name(s) found: gi|238902633 [NCBI NR]
gi|238860779 [NCBI NR]
Description(s) found:
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  • gi|238902633|ref|YP_002928429.1| dipeptide transporter [Escherichia coli BW2952] [NCBI NR]
  • gi|238860779|gb|ACR62777.1| dipeptide transporter [Escherichia coli BW2952] [NCBI NR]
    • Organism: Escherichia coli BW2952
    Length: 535 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISLKKSGM LKLGLSLVAM TVAASVQAKT LVYCSEGSPE GFNPQLFTSG TTYDASSVPL  60
   61 YNRLVEFKIG TTEVIPGLAE KWEVSEDGKT YTFHLRKGVK WHDNKEFKPT RELNADDVVF 120
  121 SFDRQKNAQN PYHKVSGGSY EYFEGMGLPE LISEVKKVDD NTVQFVLTRP EAPFLADLAM 180
  181 DFASILSKEY ADAMMKAGTP EKLDLNPIGT GPFQLQQYQK DSRIRYKAFD GYWGTKPQID 240
  241 TLVFSITPDA SVRYAKLQKN ECQVMPYPNP ADIARMKQDK SINLMEMPGL NVGYLSYNVQ 300
  301 KKPLDDVKVR QALTYAVNKD AIIKAVYQGA GVSAKNLIPP TMWGYNDDVQ DYTYDPEKAK 360
  361 ALLKEAGLEK GFSIDLWAMP VQRPYNPNAR RMAEMIQADW AKVGVQAKIV TYEWGEYLKR 420
  421 AKDGEHQTVM MGWTGDNGDP DNFFATLFSC AASEQGSNYS KWCYKPFEDL IQPARATDDH 480
  481 NKRVELYKQA QVVMHDQAPA LIIAHSTVFE PVRKEVKGYV VDPLGKHHFE NVSIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..535] PSI-BLAST 157.0 Dipeptide-binding protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ATPase activity, coupled to transmembrane movement of substances
    		•  7.32513858490159 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  7.32461921873446 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  7.32461921873446 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  7.30967709770689 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  7.29915074349679 bayes_pls_golite062009
  • oligopeptide transporter activity
    		•  7.2433462247746 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  7.22701734359888 bayes_pls_golite062009
  • peptide transporter activity
    		•  6.65358482101265 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  6.6184830833742 bayes_pls_golite062009
  • ATPase activity
    		•  6.25872881857398 bayes_pls_golite062009
  • dipeptide transporter activity
    		•  6.15818525311031 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  5.90322606085411 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  5.82359353784758 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  5.80191380928519 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  5.80159621701122 bayes_pls_golite062009
  • peptide-transporting ATPase activity
    		•  4.88181218330665 bayes_pls_golite062009
  • oligopeptide-transporting ATPase activity
    		•  4.33503585684315 bayes_pls_golite062009
  • hydrolase activity
    		•  4.03317966718526 bayes_pls_golite062009
  • transporter activity
    		•  3.92658561501282 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.71430307970333 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.34421502810243 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
    		•  3.25040168593981 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  3.16446457499691 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.76254706952599 bayes_pls_golite062009
  • molybdate transmembrane-transporting ATPase activity
    		•  2.58578176144479 bayes_pls_golite062009
  • molybdate ion transmembrane transporter activity
    		•  2.58578176144479 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.84929214408108 bayes_pls_golite062009
  • binding
    		•  1.54172013140566 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  0.88623763826001 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.75669016367838 bayes_pls_golite062009
  • polyamine transmembrane transporter activity
    		•  0.74959887541426 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  0.3752347482824 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  0.372828805396439 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.343508026849565 bayes_pls_golite062009
  • amine-transporting ATPase activity
    		•  0.22884273975653 bayes_pls_golite062009
  • sulfate transmembrane-transporting ATPase activity
    		•  0.0940079640524907 bayes_pls_golite062009
  • polyamine-transporting ATPase activity
    		•  0.0497853931936705 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.0237973852493387 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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