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Protein Overview: gi|253979690, gi...

General Information:
Name(s) found: gi|254290383 [NCBI NR]
gi|253979690 [NCBI NR]
Description(s) found:
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  • gi|254290383|ref|YP_003056131.1| predicted DNA-binding transcriptional regulator [Escherichia coli BL21(DE3)] [NCBI NR]
  • gi|253979690|gb|ACT45360.1| predicted DNA-binding transcriptional regulator [Escherichia coli BL21(DE3)] [NCBI NR]
  • DNA-binding transcriptional regulator [Escherichia coli BL21(DE3)] [E_coli_BL21_DE3_12-28-2012_sp6_AA_contam.fasta]
    • Organism: Escherichia coli BL21(DE3)
    Length: 307 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIIRRRDIK MNGKLQSSDV KNETPYNIPL LINENVISSG ISLISLWHTY ADEHYRVIWP  60
   61 RDKKKPLIAN SWVAVYTVQG CGKILLKNGE QITLHGNCII FLKPMDIHSY HCEGLVWEQY 120
  121 WMEFTPTSMM DIPVGQQSVI YNGEIYNQEL TEVAELITSP EAIKNNLAVA FLTKIIYQWI 180
  181 CLMYADGKKD PQRRQIEKLI ATLHASLQQR WSVADMAATI PCSEAWLRRL FLRYTGKTPK 240
  241 EYYLDARLDL ALSLLKQQGN SVGEVADTLN FFDSFHFSKA FKHKFGYAPS AVLKNTDQHP 300
  301 TDASPHN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] PSI-BLAST 5.69897 Apo form of the Y31V mutant dimerization domain fragment of Escherichia coli regulatory protein AraC
    2 View Details [190..307] PSI-BLAST 22.09691 Rob transcription factor, N-terminal domain; Rob transcription factor, C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle