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Protein Overview: gi|253973074, gi...

General Information:
Name(s) found: gi|254161173 [NCBI NR]
gi|253973074 [NCBI NR]
Description(s) found:
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  • gi|254161173|ref|YP_003044281.1| hypothetical protein ECB_01063 [Escherichia coli B str. REL606] [NCBI NR]
  • gi|253973074|gb|ACT38745.1| hypothetical protein ECB_01063 [Escherichia coli B str. REL606] [NCBI NR]
    • Organism: Escherichia coli B str. REL606
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYQLTALEA RVIGCLLEKQ VTTPEQYPLS VNGVVTACNQ KTNREPVMNL SESEVQEQLD  60
   61 NLVKRHYLRT VSGFGNRVTK YEQRFCNSEF GDLKLSAAEV ALITTLLLRG AQTPGELRSR 120
  121 AARMYEFSDM AEVESTLEQL ANREDGPFVV RLAREPGKRE NRYMHLFSGE VEDQPAVTDM 180
  181 SNAVDGDLQA RVEALEIEVA ELKQRLDSLL AHLGD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 61.39794 No description for 2nr3A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.24887675891573 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.727767281059745 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.667541490112564 bayes_pls_golite062009
  • DNA binding
    		•  0.635005588507232 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle