YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: YCDX_ECOBW

General Information:
Name(s) found: YCDX_ECOBW [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|238900289|ref|YP_002926085.1| putative zinc-binding hydrolase [Escherichia coli BW2952] [NCBI NR]
  • gi|238863265|gb|ACR65263.1| predicted zinc-binding hydrolase [Escherichia coli BW2952] [NCBI NR]
  • Probable phosphatase YcdX OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=ycdX PE=3 SV=1 [Swiss-Prot]
  • Putative hydrolase ycdX OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=ycdX PE=3 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli BW2952
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYPVDLHMHT VASTHAYSTL SDYIAQAKQK GIKLFAITDH GPDMEDAPHH WHFINMRIWP  60
   61 RVVDGVGILR GIEANIKNVD GEIDCSGKMF DSLDLIIAGF HEPVFAPHDK ATNTQAMIAT 120
  121 IASGNVHIIS HPGNPKYEID VKAVAEAAAK HQVALEINNS SFLHSRKGSE DNCREVAAAV 180
  181 RDAGGWVALG SDSHTAFTMG EFEECLKILD AVDFPPERIL NVSPRRLLNF LESRGMAPIA 240
  241 EFADL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..245] PSI-BLAST 48.0 Hypothetical protein YcdX


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle