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Protein Overview: gi|227889149, gi...

General Information:
Name(s) found: gi|227889149 [NCBI NR]
gi|227850378 [NCBI NR]
Description(s) found:
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  • gi|227889149|ref|ZP_04006954.1| 30S ribosomal protein S18 [Lactobacillus johnsonii ATCC 33200] [NCBI NR]
  • gi|227850378|gb|EEJ60464.1| 30S ribosomal protein S18 [Lactobacillus johnsonii ATCC 33200] [NCBI NR]
    • Organism: Lactobacillus johnsonii ATCC 33200
    Length: 78 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQQRRGGRR RRKVDFIAAN HIDYIDYKDV DLLKRFISER GKILPRRVTG TSAKNQRKLT  60
   61 VAIKRARVMG LLPFVAED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] PSI-BLAST 22.045757 No description for 1vs5R was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  3.74194835757561 bayes_pls_golite062009
  • structural molecule activity
    		•  3.45591847600399 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle