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Protein Overview: gi|145332923, gi...

General Information:
Name(s) found: gi|30695501 [NCBI NR]
gi|26449798 [NCBI NR]
gi|145332923 [NCBI NR]
Description(s) found:
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  • gi|30695501|ref|NP_850734.1| DAG1 (dof affecting germination 1); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|26449798|dbj|BAC42022.1| putative transcription factor BBFa [Arabidopsis thaliana] [NCBI NR]
  • gi|145332923|ref|NP_001078327.1| DAG1 (dof affecting germination 1); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • putative transcription factor BBFa [Arabidopsis thaliana]gi|30695501|ref|NP_850734.1| Dof zinc finger protein DAG1 / Dof affecting germination 1 (DAG1) / transcription factor BBFa (BBFA) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Splice Isoform 2 of Dof zinc finger protein DOF3.7 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: DAG1 | DAG1 (DOF AFFECTING GERMINATION 1); DNA binding / transcription factor | chr3:22907187-22908125 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: DAG1 | DAG1 (DOF AFFECTING GERMINATION 1) | chr3:22907187-22908125 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DAG1 (DOF AFFECTING GERMINATION 1); DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative transcription factor BBFa [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: DAG1 | Dof-type zinc finger DNA-binding family protein | chr3:22896212-22897150 FORWARD LENGTH=284 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Isoform 2 of Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 [ARATH-contam.fasta]
  • Isoform of Q43385, Isoform 2 of Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINVKPMEQM ISSTNNNTPQ QQPTFIATNT RPNATASNGG SGGNTNNTAT METRKARPQE  60
   61 KVNCPRCNST NTKFCYYNNY SLTQPRYFCK GCRRYWTEGG SLRNVPVGGS SRKNKRSSTP 120
  121 LASPSNPKLP DLNPPILFSS QIPNKSNKDL NLLSFPVMQD HHHHALELLR SNGVSSRGMN 180
  181 TFLPGQMMDS NSVLYSSLGF PTMPDYKQSN NNLSFSIDHH QGIGHNTINS NQRAQDNNDD 240
  241 MNGASRVLFP FSDMKELSST TQEKSHGNNT YWNGMFSNTG GSSW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] FFAS03 1.14 No description for 2cklB was found.
    2 View Details [142..284] MSA 3.070996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle