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Protein Overview: gi|18394102, gi|...

General Information:
Name(s) found: gi|20259677 [NCBI NR]
gi|18394102 [NCBI NR]
gi|15292971 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|20259677|gb|AAM14356.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18394102|ref|NP_563946.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15292971|gb|AAK93596.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxidation reduction [IEA]
    Molecular Function: nucleotide binding [IEA]
    nucleic acid binding [IEA][ISS]
    oxidoreductase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHQFGYGVE VTGLSPSVTH NDLIDFFSFS GTIQDIDIVR SGEQACTAYV MFKDSYSQET  60
   61 AVLLTGATIL DQRVCITRWG QHHEEFDFWN ATSRGFEDES DSQHYAQRSE FNAGEAVTKA 120
  121 QEVVKIMLAT GFVLGKDALS KAKAFDESHG VSAAAVARVS QLEQRIGLTD KIFTGLEAVR 180
  181 MTDQRYHVSD TAKSAVFATG RTAAAAATSV VNSSYFSSGA LWLSGALERA AKAASDLGTR 240
  241 GSRQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..244] PSI-BLAST 26.221849 Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle