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Protein Overview: ARI5_ARATH

General Information:
Name(s) found: ARI5_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana GN=ARI5 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 552 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE  60
   61 EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN DEWFADEERV RRTVGILEGP 120
  121 VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP 180
  181 SCPAAIGRDM IDKLASKEDK EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD 240
  241 VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN 300
  301 HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK 360
  361 NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD IQCTPESQLK FIAEAWLQII 420
  421 ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF 480
  481 NHFRTKLTGL TSITKTFFEN LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS 540
  541 KNGGSSRNPD GN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] MSA 1.689992 View MSA. No confident structure predictions are available.
    2 View Details [123..216] PSI-BLAST 3.522879 Solution Structure of the RING finger Domain of the human UbcM4-interacting Protein 4
    3 View Details [217..272] FFAS03 2.12 Solution Structure of the IBR domain of the RING finger protein 31 protein
    4 View Details [273..348] PSI-BLAST 7.0 Solution Structure of the C-terminal RING from a RING-IBR-RING (TRIAD) motif
    5 View Details [349..552] MSA 5.50499 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle