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Protein Overview: gi|325653, gi|96...

General Information:
Name(s) found: gi|9628889 [NCBI NR]
gi|325653 [NCBI NR]
Description(s) found:
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  • gi|9628889|ref|NP_056845.1| nef protein [Human immunodeficiency virus 2] [NCBI NR]
  • gi|325653|gb|AAB00744.1| nef protein [Human immunodeficiency virus 2] [NCBI NR]
  • nef protein [Human immunodeficiency virus 2]gi|325653|gb|AAB00744.1| nef protein [Human immunodeficiency virus 2]gi|128043|sp|P18092|NEF_HV2BE Nef protein (Negative factor) (F-protein) (3'ORF) [nrdb_11152004_Chlamydomonas]
  • nef protein [Human immunodeficiency virus 2] [nr-271106-contam.fasta]
    • Organism: Human immunodeficiency virus 2
    Length: 257 amino acids

    Gene Ontology:
    Cellular Component: cytosol [UNKNOWNLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article][TAS]
    Biological Process: regulation of defense response to virus by virus [UNKNOWNLink to PubMed articleLink to PubMed article][TAS]
    viral reproduction [TAS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASGSKKLS KHSRGLRERL LRARGDGYGK QRDASGGEYS QFQEESGREQ NSPSCEGQQY  60
   61 QQGEYMNSPW RNPATERQKD LYRQQNMDDV DSDDDDLIGV PVTPRVPRRE MTYKLAIDMS 120
  121 HFIKEKGGLQ GMFYSRRRHR ILDIYLEKEE GIIPDWQNYT HGPGVRYPMY FGWLWKLVSV 180
  181 ELSQEAEEDE ANCLVHPAQT SRHDDEHGET LVWQFDSMLA YNYKAFTLYP EEFGHKSGLP 240
  241 EKEWKAKLKA RGIPYSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle