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Protein Overview: EG11406

General Information:
Name(s) found: ribC / EG11406 [EcoGene]
Description(s) found:
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  • riboflavin synthase, alpha subunit / Riboflavin synthase; homotrimer; associated with RibE 60-mer [EcoGene]
  • riboflavin synthase, alpha subunit [Escherichia coli K12] [nr-271106-contam.fasta]
  • riboflavin synthase, alpha chain [Escherichia coli] [nr-271106-contam.fasta]
  • riboflavin synthase subunit alpha [Escherichia coli K12] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • riboflavin synthase, alpha subunit [Escherichia coli str. K-12 substr. MG1655] [Ecoli-contam-Dam1-Mind-COMA-MBP-110.fasta]
    • Organism: Escherichia coli str. K-12 substr. MG1655
    Length: 213 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: riboflavin biosynthetic process [IEA]
    Molecular Function: riboflavin synthase activity [IDALink to PubMed article][IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTGIVQGTA KLVSIDEKPN FRTHVVELPD HMLDGLETGA SVAHNGCCLT VTEINGNHVS  60
   61 FDLMKETLRI TNLGDLKVGD WVNVERAAKF SDEIGGHLMS GHIMTTAEVA KILTSENNRQ 120
  121 IWFKVQDSQL MKYILYKGFI GIDGISLTVG EVTPTRFCVH LIPETLERTT LGKKKLGARV 180
  181 NIEIDPQTQA VVDTVERVLA ARENAMNQPG TEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] PSI-BLAST 83.0 Riboflavin synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • riboflavin synthase activity
    		•  5.11500941509376 bayes_pls_golite062009
  • catalytic activity
    		•  2.05427820269334 bayes_pls_golite062009
  • transferase activity
    		•  0.708491789248912 bayes_pls_golite062009
  • binding
    		•  0.534066059984103 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle