YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: EG10870

General Information:
Name(s) found: rplI / EG10870 [EcoGene]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • 50S ribosomal subunit protein L9 / 50S ribosomal subunit protein L9 [EcoGene]
    • Organism: Escherichia coli str. K-12 substr. MG1655
    Length: 149 amino acids

    Gene Ontology:
    Cellular Component: ribonucleoprotein complex [IEA]
    ribosome [IEA]
    Biological Process: translation [IEA]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [IEA]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVILLDKVA NLGSLGDQVN VKAGYARNFL VPQGKAVPAT KKNIEFFEAR RAELEAKLAE  60
   61 VLAAANARAE KINALETVTI ASKAGDEGKL FGSIGTRDIA DAVTAAGVEV AKSEVRLPNG 120
  121 VLRTTGEHEV SFQVHSEVFA KVIVNVVAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 45.69897 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  8.6660890573497 bayes_pls_golite062009
  • structural molecule activity
    		•  8.10075613300028 bayes_pls_golite062009
  • catalytic activity
    		•  0.295853503406924 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle