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Protein Overview: SYY_SALTY

General Information:
Name(s) found: SYY_SALTY [Swiss-Prot]
Description(s) found:
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  • Tyrosine--tRNA ligase OS=Salmonella typhimurium GN=tyrS PE=3 SV=1 [Swiss-Prot]
  • Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) [nr-271106-contam.fasta]
    • Organism: Salmonella enterica subsp. enterica serovar Typhimurium
    Length: 424 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSNLIKQL QERGLVAQVT DEDALAERLA QGPIALYCGF DPTADSLHLG HLVPLLCLKR  60
   61 FQQAGHKPVA LVGGATGLIG DPSFKAAERK LNTEETVQEW VAKIRKQVAP FLDFDCGENS 120
  121 AIAANNYDWF GSMNVLTFLR DIGKHFSVNQ MINKEAVKQR LNRDDQGISF TEFSYNLLQG 180
  181 YDFACLNKLH GVALQIGGSD QWGNITSGID LTRRLHQNQV FGLTVPLITK ADGTKFGKTE 240
  241 GGAVWLDPKK TSPYKFYQFW INTADADVYR FLKFFTFMDI EEINALEEED KNSGKAPRAQ 300
  301 YVLAEQVTRL VHGEEGLVAA KRITECLFSG SLSALSEADF EQLAQDGVPM VEMEKGADLM 360
  361 QALVDAELQP SRGQARKTIA SNAVTINGEK QSDPEYIFND EDRLFGRYTL LRRGKKNYCL 420
  421 ICWK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..333] PSI-BLAST 95.522879 Tyrosyl t-RNA Synthetase from E.coli Complexed with Tyrosine
    2 View Details [334..424] PSI-BLAST 23.154902 Tyrosyl-trna synthetase (TyrRS), C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  4.38130670432475 bayes_pls_golite062009
  • structural molecule activity
    		•  4.02543122782129 bayes_pls_golite062009
  • binding
    		•  1.19763920760651 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.926923419656671 bayes_pls_golite062009
  • protein binding
    		•  0.255198885489521 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle