YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PUS1_YEAST

General Information:
Name(s) found: PUS1_YEAST [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • tRNA pseudouridine synthase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUS1 PE=1 SV=1 [Swiss-Prot]
  • Pus1p [Saccharomyces cerevisiae] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 544 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEENLRPAY DDQVNEDVYK RGAQSKLTKA RKADFDDEKD KKKDNDKHID KRPKSGPRLD  60
   61 ENGNPLPKEP RLPKRKVAVM VGYCGTGYHG MQYNPPNPTI ESALFKAFVE AGAISKDNSN 120
  121 DLKKNGFMRA ARTDKGVHAG GNLISLKMII EDPDIKQKIN EKLPEGIRVW DIERVNKAFD 180
  181 CRKMCSSRWY EYLLPTYSLI GPKPGSILYR DIEESKTELP GVLDEDLESK EFWEEFKKDA 240
  241 NEKFSTEEIE AILAYVPPAR DEFDINEELY QKVKKYKQLE NAHRRRYRIS AAKLAKFRAS 300
  301 TSQYLGAHNF HNFTLGKDFK EPSAIRFMKD IKVSDPFVIG DAQTEWISIK IHGQSFMLHQ 360
  361 IRKMVSMATL ITRCGCPVER ISQAYGQQKI NIPKAPALGL LLEAPVFEGY NKRLEQFGYK 420
  421 AIDFSKYQDE VDKFKMKHIY DKIYKEEVDE NVFNAFFSYI DSFNKVTGAQ GEETADKSGP 480
  481 AVQKSIFEFL TAKGIPGLTD APESNKKIKQ RKRMEEEEAA SKKAEISSTT QSNEPEVQPE 540
  541 AAAN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..64] deduced N/A No confident structure predictions are available.
    2 View Details [65..201] PSI-BLAST 100.68867 Pseudouridine synthase I
    3 View Details [202..306] PSI-BLAST 100.68867 Pseudouridine synthase I
    4 View Details [307..544] MSA 3.146957 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle