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Protein Overview: RMD5_YEAST

General Information:
Name(s) found: RMD5_YEAST [Swiss-Prot]
Description(s) found:
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  • Sporulation protein RMD5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD5 PE=1 SV=1 [Swiss-Prot]
  • Sporulation protein RMD5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD5 PE=3 SV=1 [YEAST.fasta.20160308]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 421 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELLDSFET EFAKFYTDSN LEETNLQKCL DHTHEFKSQL KKLKAHLNKH IQESKPEVYN  60
   61 KLSDKEKQKF KRKRELIIEK LSKSQRQWDH SVKKQIKYVS QQSNRFNKST LNKLKEFDID 120
  121 SVYVNKLPKE TMENVNEAIG YHILRYSIDN MPLGNKNEAF QYLKDVYGIT NKESTEFIEM 180
  181 GQIVHDLKKG DTESCLKWCS NEMESLSSNH TALSSLKFDL YTLSAMQIVK HGNPVELYYQ 240
  241 ITQNAPLDCF RHREKELMQN VVPLLTKSLI GQPIEDIDSK VNKELKECTS LFIKEYCAAK 300
  301 HIFFDSPLFL IVLSGLISFQ FFIKYKTIRE LAHVDWTTKD ELPFDVKLPD FLTHFHPIFI 360
  361 CPVLKEETTT ENPPYSLACH HIISKKALDR LSKNGTITFK CPYCPVNTSM SSTKKVRFVM 420
  421 L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] MSA 1.021992 View MSA. No confident structure predictions are available.
    2 View Details [73..280] MSA 4.034995 View MSA. No confident structure predictions are available.
    3 View Details [281..421] MSA 1.02697 View MSA. Confident ab initio structure predictions are available.
    4 View Details [316..421] PSI-BLAST 3.69897 Solution Structure of the RING domain of the Tripartite motif protein 32


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.61

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle