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Protein Overview: WHI4_YEAST

General Information:
Name(s) found: WHI4_YEAST [Swiss-Prot]
Description(s) found:
  • Protein WHI4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WHI4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 649 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVHNQTNL NESKFLIERA FSSSSETVPL SKEATYPMPT AYSFSAVRSN SETNIKRENP  60
   61 QGFAKEPIMT SMLHNLTMST GKGNGNDVNS LAPHDVDVGP YCLLLRNLPK DITLRECYCI 120
  121 FSLATGVSSI ELKRDDREPF NDNEKVVVVK FGSLSLVTHY ANILNSKSEI FGPSFPFRSH 180
  181 IDVVNEQTQL PVSFQEHVSS GTTNSSPKNY QLSSSAQNEI QNQSFNTISY GKTSSSPLGP 240
  241 SAAKPRPSLL SERSLRFSFN DPFGLETISQ RKESVPFLRN SISQHDLSNV TTTPVPAGMP 300
  301 PQKDAGKSLL LLEKDEINES IWNGDELVND VGNSSFGASL QEPPMSSTPV MEWNASSTAN 360
  361 IPLFQLSSQE NHQSNLLPPS HHSISQDVPH IQSQPNLNNS GVIHSATSLP HYHLLNQINA 420
  421 STKTQSIQQS VSNVPSNLDL NLQTENGHPQ SSAPNGSSIF NNQKVNQGFL VSEQDTSTIS 480
  481 RQKECSSTAS ASAFSKNNET NVAGSTTISQ ADLSLLAKVP PPANPADQNP PCNTLYVGNL 540
  541 PPDATEQELR QLFSNQQGFR RLSFRNKMNS HGHGNGHGHG PICFVEFEDV SFATRALAEL 600
  601 YGSQLPHPRP SLNNKGGIRL SFSKNPLGVR GSNSRSKSGY SFNGSYGKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..326] deduced N/A No confident structure predictions are available.
    2 View Details [327..447] MSA 4.225997 View MSA. No confident structure predictions are available.
    3 View Details [448..511] deduced N/A No confident structure predictions are available.
    4 View Details [512..649] PSI-BLAST 37.232149 Splicesomal U1A protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.80563734517858 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.10800250002791 bayes_pls_golite062009
  • RNA binding
    		•  1.27892507616795 bayes_pls_golite062009
  • protein binding
    		•  1.02232785292059 bayes_pls_golite062009
  • mRNA binding
    		•  0.358102192108578 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  2.80563734517858 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.10800250002791 bayes_pls_golite062009
  • RNA binding
    		•  1.27892507616795 bayes_pls_golite062009
  • protein binding
    		•  1.02232785292059 bayes_pls_golite062009
  • mRNA binding
    		•  0.358102192108578 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle