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Protein Overview: RIBB_SHEON

General Information:
Name(s) found: RIBB_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • 3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella oneidensis (strain MR-1) GN=ribB PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 217 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: riboflavin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQSLLAPFG TAIERVEAGL NALRQGLGVL VVDDEDRENE GDLIFAAESL TNAQMAMLIR  60
   61 ECSGIVCLCL PDEKVKALAL PPMVENNSSQ YGTAFTVSIE AKVGVTTGVS AADRVTTIKT 120
  121 AIADHAKPSD LARPGHVYPL RAQPGGVLTR RGHTEGTIDL MQLAGLKPAG VLCEVTNPDG 180
  181 TMARLPEIIA FGALHNMPVL TIEDIVVYRK SLLANVG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..217] PSI-BLAST 95.39794 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
    		•  7.56167968780416 bayes_pls_golite062009
  • GTP cyclohydrolase activity
    		•  2.51581618679202 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  1.92717548101547 bayes_pls_golite062009
  • cyclohydrolase activity
    		•  1.48770406828775 bayes_pls_golite062009
  • binding
    		•  1.05088380360844 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.637633326908211 bayes_pls_golite062009
  • catalytic activity
    		•  0.343636936190038 bayes_pls_golite062009
  • protein binding
    		•  0.291469273637145 bayes_pls_golite062009
  • DNA binding
    		•  0.21448652890147 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle