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Protein Overview: gi|24347790, gi|...

General Information:
Name(s) found: gi|24373490 [NCBI NR]
gi|24347790 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24373490|ref|NP_717533.1| type II citrate synthase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347790|gb|AAN54977.1|AE015636_1 citrate synthase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 428 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tricarboxylic acid cycle [ISSLink to PubMed article]
    Molecular Function: citrate (Si)-synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLKAKLEL PGNDSIELPV KQGSAGFDVI DISKLGSKGY FTFDPGFLAT ASCESAITYI  60
   61 DGDQGILLHR GYPIEQLAVD SDYLDLCYLL LYGELPTKEQ YAEFVHTVKT HTMVHEQIAF 120
  121 FFRGFRRDAH PMAMLCGVTG ALSAFYQDSL DVNDPRHREI AAYRLVSKMP TIAAMCYKYS 180
  181 SGQPFVYPRN DLSYAGNFLS MMFAVPCEEY KVNPIVERAM DRIFILHADH EQNASTSTVR 240
  241 LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLQMLEEIG SVDRIPEFIA RAKDKNDPFR 300
  301 LMGFGHRVYK NFDPRAKVMR ETCHEVLKEL KVQDPLLDVA MELERIALED EYFISKKLYP 360
  361 NVDFYSGIIM KAIGIPTSMF TVLFALSRTV GWIAHWKEML DQPGHKISRP RQLYTGETAR 420
  421 DFVDLDKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..428] PSI-BLAST 173.0 Three Dimensional Structure Analysis Of The Variant R109L NADH Complex of Type II Citrate Synthase From E. Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • citrate (Si)-synthase activity
    		•  7.90380661459876 bayes_pls_golite062009
  • transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
    		•  7.35970609422108 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  4.98392594633005 bayes_pls_golite062009
  • catalytic activity
    		•  2.51855037019879 bayes_pls_golite062009
  • transferase activity
    		•  2.22659761972612 bayes_pls_golite062009
  • protein binding
    		•  1.36043926413144 bayes_pls_golite062009
  • binding
    		•  1.35315896797529 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle