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Protein Overview: gi|24349939, gi|...

General Information:
Name(s) found: gi|24375162 [NCBI NR]
gi|24349939 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375162|ref|NP_719205.1| long-chain-fatty-acid--CoA ligase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349939|gb|AAN56649.1|AE015801_7 long-chain-fatty-acid--CoA ligase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 532 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fatty acid metabolic process [ISSLink to PubMed article]
    Molecular Function: long-chain fatty acid-CoA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYDQESQLE LGKYSSLIDL IERTSQRFGD KTAYACLGKN SSFNEIERDS RYFAAYLQNN  60
   61 TNLKPGDRIA IQLPNITQFV IAAYGALRAG LILVNTNPLY TERELIHQFN DSGAKALVVL 120
  121 SDLLPTLAKV VATTPIELVI STHPLDLIDP QVQPKTGLKN VEFCHVLQQG ALLPFTRFVP 180
  181 TLSDLAALQY TGGTTGLSKG AMLTHGNMLA NAAQVKSRIG SVISEGEDIF VAPLPIYHIY 240
  241 AFMVNLVLYF ECGGCSVLIP NPRDINGLIK TLAKYPFTGF AGLNTLFVAL CHQPEFKALN 300
  301 FSHLKITISG GTALTAAAAN LWQQTTGNTI SEGYGLSETS PVISLNAPGY QKIGTIGKPV 360
  361 LGTEVKLLDE SGNEVTQGTA GELAARGPQV MLGYWNNPQE TANVMTPDGF FKTGDIAILN 420
  421 EEGFHQIVDR KKDMIIVSGF NVYPNEVENV LASHPNIIEC AVVGVKDDHS GEAVKAFIVL 480
  481 KDDSQDHEKI KTAILNFCRE QLTAYKLPKQ IEFMSQLPKS TVGKILRREL KN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..532] PSI-BLAST 107.0 No description for 2v7bA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle