Protein Overview: ATPD_GEOSL

General Information:
Name(s) found:	ATPD_GEOSL [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|39995221\|ref\|NP_951172.1\| F0F1 ATP synthase subunit delta [Geobacter sulfurreducens PCA] [NCBI NR] gi\|39981983\|gb\|AAR33445.1\| ATP synthase F1, delta subunit [Geobacter sulfurreducens PCA] [NCBI NR] ATP synthase subunit delta OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=atpH PE=3 SV=1 [Swiss-Prot] ATP synthase F1, delta subunit [Geobacter sulfurreducens PCA]gi\|39981983\|gb\|AAR33445.1\| ATP synthase F1, delta subunit [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas] ATP synthase F1, delta subunit [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
Organism:	Geobacter sulfurreducens PCA
Length:	180 amino acids
Gene Ontology:
Cellular Component:	plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [ISS]
Biological Process:	ATP synthesis coupled proton transport [ISS]
Molecular Function:	hydrogen ion transporting ATP synthase activity, rotational mechanism [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISNAIARRY AKALVQLGAE EGAVDRFGVE LGQFTALLDG NADLASVLKS PAYRIEAKRE  60
   61 ILRDVLAKLN LSGTVSNFLQ VLLDRGRIGF TPQIAHSYAV FADELSGIVR PVLTSAFPLD 120
  121 DAQVEGMKSA LAKATGKRVE LSAQVDSALI GGVVTKIGDK VFDGSVRTQL NRIQDILQKG 180
  181

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
hydrogen ion transporting ATP synthase activity, rotational mechanism	14.7422820889757	bayes_pls_golite062009
hydrogen ion transmembrane transporter activity	12.9278793563887	bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity	11.1783751674743	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	10.0680074813957	bayes_pls_golite062009
cation transmembrane transporter activity	6.33234611151135	bayes_pls_golite062009
ion transmembrane transporter activity	6.2273693570543	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	5.80354336411519	bayes_pls_golite062009
transporter activity	4.02094516916098	bayes_pls_golite062009
substrate-specific transporter activity	3.93981768923161	bayes_pls_golite062009
transmembrane transporter activity	3.93135059223129	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..180]	PSI-BLAST	25.522879	N-TERMINAL DOMAIN OF THE DELTA SUBUNIT OF THE F1F0-ATP SYNTHASE FROM ESCHERICHIA COLI, NMR, MINIMIZED AVERAGE STRUCTURE

Protein Overview: ATPD_GEOSL

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: