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Protein Overview: RNPA_LISMO

General Information:
Name(s) found: RNPA_LISMO [Swiss-Prot]
Description(s) found:
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  • gi|16804892|ref|NP_466377.1| ribonuclease P [Listeria monocytogenes EGD-e] [NCBI NR]
  • Ribonuclease P protein component OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=rnpA PE=3 SV=1 [Swiss-Prot]
  • ribonuclease P protein component [Listeria monocytogenes str. 4b F2365]gi|16804892|ref|NP_466377.1| ribonuclease P protein component [Listeria monocytogenes EGD-e]gi|47097240|ref|ZP_00234802.1| ribonuclease P protein component [Listeria monocytogenes st [nrdb_11152004_Chlamydomonas]
  • ribonuclease P protein component [Listeria monocytogenes] [nr-271106-contam.fasta]
  • ribonuclease P [Listeria monocytogenes EGD-e] [nr-271106-contam.fasta]
    • Organism: Listeria monocytogenes EGD-e
    Length: 119 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKYRIKKN DDFQKVFRRG KSFANRQFVV YTLKQEGSNH FRIGLSVSKK IGNAVCRNRI  60
   61 KRYIRQSFHE LESQINPENE YIIIARKPAA NMDFHEVKKS LIHVLKVGRV LKQKPNNSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] PSI-BLAST 23.69897 RNase P protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • tRNA-specific ribonuclease activity
    		•  6.1454778021122 bayes_pls_golite062009
  • ribonuclease P activity
    		•  5.34408239201797 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  3.49304472389303 bayes_pls_golite062009
  • RNA binding
    		•  2.94550290381601 bayes_pls_golite062009
  • structural molecule activity
    		•  2.91017901273919 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
    		•  2.16830676862423 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
    		•  1.94887328847363 bayes_pls_golite062009
  • exoribonuclease activity
    		•  1.90081280972069 bayes_pls_golite062009
  • mRNA binding
    		•  1.42024615739664 bayes_pls_golite062009
  • ribonuclease activity
    		•  1.31550811238109 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.20748032530392 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.05662964529454 bayes_pls_golite062009
  • binding
    		•  0.907487229190259 bayes_pls_golite062009
  • catalytic activity
    		•  0.878454819018611 bayes_pls_golite062009
  • DNA binding
    		•  0.828609700556836 bayes_pls_golite062009
  • nuclease activity
    		•  0.69721312877891 bayes_pls_golite062009
  • 3'-5' exonuclease activity
    		•  0.477960254167 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle