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Protein Overview: gi|30260639, gi|...

General Information:
Name(s) found: gi|30260639 [NCBI NR]
gi|30254007 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|30260639|ref|NP_843016.1| prophage LambdaBa04, tape measure protein, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30254007|gb|AAP24502.1| prophage LambdaBa04, tape measure protein, putative [Bacillus phage lambda Ba01] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 1311 amino acids

    Gene Ontology:
    Cellular Component: viral assembly intermediate [ISSLink to PubMed article]
    Biological Process: virion assembly [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGRIKGITI EIGGETTGLQ SALKDVNKRS SELSKELKDI ERLLKFNPGN VEALAQKQQL  60
   61 LTQQIENTTK KLDSLKSAQQ QVQAQFESGA ISEEQYRAFR REIEFTEGQL NGFKNSLAGL 120
  121 KAEQEKAASS TRQLETLFSA TGKSVDDFAD ALGNRLVNAI KNGTASSRQL EQAIEIVGRE 180
  181 ALGAEADIGK LQQALRSVDD GNSIQNIRND LNQLSQEAEE ASESVKGLGV ELENVLGGIV 240
  241 AGGGIQEVIG QALDMSELKT KIDITFDVPE SSKRSVEDAI RTVVAYGGDA EEALEGVRRQ 300
  301 WSLNKDASDA ANTEIIKGAA NIASSYSQID FTELIQETNE IGSELNISNK EALGLVNSLL 360
  361 KIGFPPEQLD IIAEYGAQLR RVGYTAQEVQ SIMASAAKEK SWNIDNLLDG LKEGRIRSVE 420
  421 MARGLSNSMK DAVRDAVDDT EKMSDAQISA MQKGFAKQES ALANSFSNQE KALSKSHSRR 480
  481 QNELAKSLDA EYNAVSKSYE NQQKNLEKKL SAEYDAASKN YDRQQKALEK SLDAEVKAFE 540
  541 KSSEQKIKLI DKEYMERMKL IDEEKYNRLK AVDDQINSLD AKTAAEDKYF KDRENAEKRA 600
  601 DLKVKISKAK NEEERQAAIK ALRDLEEKMR LDKIREERKS QIDRLKEEKD SIKEASDAKK 660
  661 EALKSEFDSR KERVKEQINN EKEALKERQQ EQKEAFQQNK QENLKAISES NKAQLDSLRE 720
  721 VNQANLSALK ENHNERKQAL SERLSDEMDA VRESHRAELE SFKEMNAEKL ELAKNPPDSA 780
  781 AVQEIFAQLE GWGKAIAKGG EEGKQAFVDM VKWLDQIEDA DLKEAIGVEL FGTMWEDQGQ 840
  841 KIINTILQTE QKQADLKQGI DDLQQSVSKT DASPMVKLKE AMNDLKQALE PILLIIADVV 900
  901 SAFAGFISAH PVLAAAITAI TVAIGILVGI CAALAPVIFL ATSGAITFAG VMAALTSPIA 960
  961 LVVAAIAGLI AIWVLFGDKI MAIYNEYFKP TIDQIVSIIV STLKPVFEQG FAIIKDVVQD1020
 1021 AFIIIQRVWN EILSPVFSVI TSIIKTVLLP AFKFVFSAIG SVVSDAFSGI KDMWNNVLKP1080
 1081 ILNGIIDFIS GIFSGNWEKA WGGIVKIFSG VFEGIKSAAK APINAVVSML NGLIEGINSI1140
 1141 EMPDWVPFVG GSKPSIPRIP MLATGGHVLG DGSFIAGEAG PELFTKRGNR VSVTPLSSTE1200
 1201 KSLGITGTMS RLIGDMSYSM ASSMKELSGL KSVMSNVYGS MASSSQAMSR NASQRTAEGN1260
 1261 SSSNANKSDS YNFADMFRGS TFVVREEADV QKLAVELGKY IKASGRRVGQ L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..259] PSI-BLAST 17.221849 Heavy meromyosin subfragment
    2 View Details [260..725] FFAS03 2.04 COLICIN IA
    3 View Details [726..827] deduced N/A No confident structure predictions are available.
    4 View Details [828..955] MSA 1.461992 View MSA. No confident structure predictions are available.
    5 View Details [956..1141] deduced N/A No confident structure predictions are available.
    6 View Details [1142..1311] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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