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Protein Overview: gi|30261594, gi|...

General Information:
Name(s) found: gi|30261594 [NCBI NR]
gi|30255448 [NCBI NR]
Description(s) found:
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  • gi|30261594|ref|NP_843971.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30255448|gb|AAP25457.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. Ames] [NCBI NR]
  • isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. Sterne]gi|47526794|ref|YP_018143.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. 'Ames Ancestor']gi|30261594|ref|NP_843971.1| isopentenyl-diphosphate delta-isomerase [B [nrdb_11152004_Chlamydomonas]
  • isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
  • isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 349 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: isoprenoid biosynthetic process [ISSLink to PubMed article]
    Molecular Function: isopentenyl-diphosphate delta-isomerase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRAKRKLDH IEYALSTGQS RTHGFHDIEF VHQSLPNSSY ETITCETKIG ELSLSSPIFI  60
   61 NAMTGGGGEK TLHINEQLAY VAKHHNLAMA VGSQMAALKD ESEAASYKII RKVNPNGIFF 120
  121 ANLGSEATVE QAERAVDMVG ANALQIHLNV IQELTMPEGD RDFTGVLQRI EEIVLNSKVP 180
  181 VIVKEVGFGM SKETMQQLAS VGVTAIDIGG QGGTNFAAVE NERRQRMLSY FNNWGIQTAT 240
  241 SIIEATSTNN NLSFIASGGI QTALDVAKAI ALGANTTAFA GYFLRILMED GIEKLVDEID 300
  301 LLHTDLKFIM TALGAKTIEE LQSVPLVIKG ETYHWLTQRG IDTTHYSRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..349] PSI-BLAST 68.69897 Isopentenyl-diphosphate delta-isomerase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.31793084876503 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.59709503080261 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  1.23058140939496 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle